Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAETTKIFESHLVKQALKDSVLKLYPV-----YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIF---IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNE--IALFTLLMTLTIIFLVVILTMYPLAKFLN------FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRV--KEAGGHIPVDLDA-LVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLGGMIVPFIGIKLIDLIIQLFV |
| 4UMV Chain:A ((160-657)) | -------------------TLVGLYPIARQALRLIKSGSYFAIETLMSVA-------------AIGALFIGATAEAAMVLLLFLIGERL-EGWAASRARQGVSALMALKPETATRL--RNGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATG---DKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSG-----LAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIP---------TAESQRALVGSGIEAQVNG------ERVLICAAGKH-PADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLE-FKAGLLPEDKVKAVTKLNQHAPL-AMVGDGINDAPAMKAAAIGIAMGSGTDVALETAD------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139162 for 3958 contacts (-35.2/contact) +
2D Compatibility (PS) -52112 + (NN) -25436 + (LL) 17044
1D Compatibility (HY) -26800 + (ID) 7800
Total energy: -234266.0 ( -59.19 by residue)
QMean score : 0.349
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