Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNP----FAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
3ZQ5 Chain:A ((84-171))
-------------GQISSLNPSKLWARVMG---------DDFVIFDGVFHRNSDGLLVCELEP-AYTSDNLPFLGFYHMA---NAALNRLRQQANLRDFYDVIVEEVRRMTGFD--
General information:
TITO was launched using:
RESULT:
Template:
3ZQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10186 for 419 contacts (24.3/contact) +
2D Compatibility (PS) -9000 + (NN) -1431 + (LL) 2524
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -6771.0 ( -16.16 by residue)
QMean score : 0.035
(partial model without unconserved sides chains):
PDB file :
Tito_3ZQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZQ5-query.scw
PDB file :
Tito_Scwrl_3ZQ5.pdb
: