Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNYNFITIFLNIVIIIFFSIGLILTT-HIIIDKIKSNTK
2ZXE Chain:G ((15-42))
------------------------------DYYRLRVVGLIVAAVLCVIGIIILLAGK----------
General information:
TITO was launched using:
RESULT:
Template:
2ZXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9418 for 99 contacts (-95.1/contact) +
2D Compatibility (PS) -2642 + (NN) 417 + (LL) 3420
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -11723.0 ( -118.41 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXE-query.scw
PDB file :
Tito_Scwrl_2ZXE.pdb
: