Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVI-AFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAF-TQGILIMNETDLQGLLFWLSGS---VSLRNIWDIPWIIPLVLILILIAFSMAAH-INILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIY-IMKKGRQRL |
2QI9 Chain:A ((34-324)) | --------------------------GEQWISPGDW------FTPRGEL--FVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILL---RFARRHLSTSRLLLAGVALGIISSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSW-----LMLALIPVLLWISSQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309107 for 2323 contacts (-133.1/contact) +
2D Compatibility (PS) -29885 + (NN) -13093 + (LL) 4848
1D Compatibility (HY) -28800 + (ID) 5300
Total energy: -381337.0 ( -164.16 by residue)
QMean score : 0.314
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