Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASS-AAVYGDLPDLPKSDQSL-ILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFF-----GDGLQTRDFVYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTVETGLK---DYFNFEVDNIEEVTAKEVEMS |
| 2P5Y Chain:A ((2-311)) | --RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVP--FFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG--VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGE-AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLEGI---YNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGAV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199908 for 2629 contacts (-76.0/contact) +
2D Compatibility (PS) -30959 + (NN) -948 + (LL) 1376
1D Compatibility (HY) -14800 + (ID) 5650
Total energy: -250889.0 ( -95.43 by residue)
QMean score : 0.493
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