Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGEIFIQGKSITKAHGKALL-EMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLFPKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDPLTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVFSEIYGRTIKEDEKLGVN
4YMV Chain:J ((17-222))-------------------LKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKIN--NGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNK-------KEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEE-----------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -118129 for 1627 contacts (-72.6/contact) +
2D Compatibility (PS) -22328 + (NN) -10467 + (LL) 3164
1D Compatibility (HY) -17600 + (ID) 4350
Total energy: -169710.0 ( -104.31 by residue)
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4YMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMV-query.scw
PDB file : Tito_Scwrl_4YMV.pdb: