Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKD---EEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDEGNDMIESER |
4K36 Chain:A ((166-222)) | -----------------------------------------------VTSNTARHVNKVYKYFKEK---DFKFLQFINCLDPLYEEKGKYNYSLKPKDY--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5024 for 236 contacts (-21.3/contact) +
2D Compatibility (PS) -4788 + (NN) 31 + (LL) 14580
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -551.0 ( -2.33 by residue)
QMean score : 0.267
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