Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTA-----SLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNG--FISNAKLVVDDKKIPKRMPQQDYKQKRWFGL
2WJF Chain:A ((5-247))
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAEIYYTPDVLDKLEKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAY-DLVTQKYGEAKAQELFIDNPRKIVMDQLI-----------------
General information:
TITO was launched using:
RESULT:
Template:
2WJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124174 for 1955 contacts (-63.5/contact) +
2D Compatibility (PS) -25191 + (NN) -10460 + (LL) 908
1D Compatibility (HY) -10400 + (ID) 4200
Total energy: -173517.0 ( -88.76 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2WJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJF-query.scw
PDB file :
Tito_Scwrl_2WJF.pdb
: