Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
3X1L Chain:B ((231-286)) | -----------------------------------------------------------------------STPTIGKVGEIVQ-----ELEKRLNAKIDDYLLVSSRPTAISGWDMHEKKPKGTKFAIPPG----------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3X1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3505 for 245 contacts (-14.3/contact) +
2D Compatibility (PS) -5825 + (NN) 2042 + (LL) 9952
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -236.0 ( -0.96 by residue)
QMean score : 0.221
|
|
|