Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGYHYQK
4FNH Chain:A ((3-110))
MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNYLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGYHYQK
General information:
TITO was launched using:
RESULT:
Template:
4FNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17165 for 682 contacts (-25.2/contact) +
2D Compatibility (PS) -11613 + (NN) -2095 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 5350
Total energy: -50223.0 ( -73.64 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4FNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNH-query.scw
PDB file :
Tito_Scwrl_4FNH.pdb
: