Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
3GV1 Chain:A ((23-40))
-----------DPDCPFCKRLEHEFEKMT----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 100 for 64 contacts (1.6/contact) +
2D Compatibility (PS) -1799 + (NN) -1013 + (LL) 2352
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -2210.0 ( -34.53 by residue)
QMean score : 0.009
(partial model without unconserved sides chains):
PDB file :
Tito_3GV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GV1-query.scw
PDB file :
Tito_Scwrl_3GV1.pdb
: