Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYSHSKVDEPLKLT---FPHLQHI----MQHFEALTVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNNGTKLISNPGCFPTATLLALHPLISEKIVDLSSI-IIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSIIAGQDVSVIFTPHLVPMTRGILSTIYVKFSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
3DR3 Chain:A ((4-336)) | MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV--SLQPYGVFTHRHQPEIATHL----GAD--VIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PALKNVVGLPFCDIGFAVQ--GEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -228127 for 2860 contacts (-79.8/contact) +
2D Compatibility (PS) -34597 + (NN) -7110 + (LL) 1016
1D Compatibility (HY) -28800 + (ID) 6500
Total energy: -304118.0 ( -106.33 by residue)
QMean score : 0.413
|
|
|