Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMENSTTEARNEATMHLDEMTVEEALITMNKEDQQVPLAVRKAIPQLTKVIKKTIAQYKKGGRLIYIGAGTSGRLGVLDAAECVPTFNTDPHEIIGIIAGGQHAMTMAVEGAEDHKKLAEED-LKNI--DLTSKDVVIGIAASGKTPYVIGGLTFANTIGATTVSISCNEHAVISEIAQYPVEVKVGPEVLTGST-------------RLKSGTAQKLILNMISTITMVGVGKVYDNLMIDVKATNQKLIDRSVRIIQEI-------CAITYDEAMALYQVSEHDVKVATVMGMCGISKEEATRRLLNNGDIVKRAIRDRQP |
| 4MSU Chain:A ((322-578)) | --------------------------------------------PKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDVRGFLI----------------FTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ--TIVEQVKEKTNHIQALAHSTVGQTLPIPLK-KLFPSIISITWPLLFFEYEGNFIQKFQRELSTKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLRAIHFPQPLSDDIRAAPISCHVQVAHEK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86442 for 1577 contacts (-54.8/contact) +
2D Compatibility (PS) -22050 + (NN) -2551 + (LL) 6776
1D Compatibility (HY) -16400 + (ID) 2600
Total energy: -123267.0 ( -78.17 by residue)
QMean score : 0.323
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