Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
| 2L8S Chain:A ((11-34)) | -----------------------------------------------------------------VILLSAFAGLLLLMLLILALWKIG-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10596 for 95 contacts (-111.5/contact) +
2D Compatibility (PS) -2425 + (NN) 73 + (LL) 16692
1D Compatibility (HY) -3200 + (ID) 150
Total energy: 394.0 ( 4.15 by residue)
QMean score : 0.105
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