Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAAD--QFSDAGAGKQEALIS-FTFK----VDEKIKKYPFNQRDIELVNQVDGVLDAKLKENK----EEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK |
| 2Z80 Chain:A ((213-305)) | -------------------------LLEIFVDVTSSVECLEL----RDTDLDTFHFS------TNSLIKKFTFRNVKITDESLFQV------MKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32100 for 427 contacts (-75.2/contact) +
2D Compatibility (PS) -7531 + (NN) 2366 + (LL) 23588
1D Compatibility (HY) -10000 + (ID) 1250
Total energy: -24927.0 ( -58.38 by residue)
QMean score : 0.321
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