Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNDLLVMSVVYILTSVIMFYINGLSKQFFTYVVGFPIIYFGYICLVNLIKKRSRNN
3WMG Chain:A ((159-168))
---------------GIIVAFIFAP---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1748 for 31 contacts (-56.4/contact) +
2D Compatibility (PS) -1053 + (NN) -132 + (LL) 4324
1D Compatibility (HY) -1600 + (ID) 50
Total energy: -259.0 ( -8.35 by residue)
QMean score : -0.265
(partial model without unconserved sides chains):
PDB file :
Tito_3WMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WMG-query.scw
PDB file :
Tito_Scwrl_3WMG.pdb
: