Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN
3L5N Chain:M ((5-87))
-----------------------------TSLPTSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALKSK--
General information:
TITO was launched using:
RESULT:
Template:
3L5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3834 for 539 contacts (-7.1/contact) +
2D Compatibility (PS) -9152 + (NN) -3779 + (LL) 2620
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -20295.0 ( -37.65 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_3L5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L5N-query.scw
PDB file :
Tito_Scwrl_3L5N.pdb
: