Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPF-PEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQK-DHKLVMLFGDNLLDFTDPKEATAES-REALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3ET4 Chain:A ((12-255)) | -----------------------------------------QANMQLQQQAVLG------LNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKG--KKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSSEKAGTIDDMKRLGFNGVEESAFYLK-KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ET4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14792 for 1830 contacts (8.1/contact) +
2D Compatibility (PS) -25837 + (NN) -14194 + (LL) 4012
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -40677.0 ( -22.23 by residue)
QMean score : 0.396
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