Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLT---FKFGA------ENSNVIMIVASILLLFSFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL |
4M2T Chain:A ((708-768)) | ----------------------------------------------------------------------------------------------------------VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37567 for 251 contacts (-149.7/contact) +
2D Compatibility (PS) -5166 + (NN) 284 + (LL) 14828
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -35721.0 ( -142.31 by residue)
QMean score : 0.124
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