Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLIGLVIVALVLLAACGSNNDKKVTIGV-ASNDTKAWEKVKELAK-KDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK |
3K2D Chain:A ((1-237)) | ------------------GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDR-QVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVEDKES----PYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKEIFK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64039 for 1933 contacts (-33.1/contact) +
2D Compatibility (PS) -26119 + (NN) -16915 + (LL) 4228
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -125795.0 ( -65.08 by residue)
QMean score : 0.575
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