Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEIDFDIAIIGAGPAGMTAAVYASRANLKT-VMIERGIPGGQMANTEEVENFPGF-EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN-KELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD-----LGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA |
| 2Q0L Chain:A ((3-310)) | ------DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176674 for 2624 contacts (-67.3/contact) +
2D Compatibility (PS) -32957 + (NN) -16278 + (LL) 908
1D Compatibility (HY) -23200 + (ID) 6100
Total energy: -254301.0 ( -96.91 by residue)
QMean score : 0.527
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