Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF |
2LYY Chain:A ((36-43)) | -------------------------------FMWALARY----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53 for 23 contacts (-2.3/contact) +
2D Compatibility (PS) -747 + (NN) 736 + (LL) 10024
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 8610.0 ( 374.35 by residue)
QMean score : 0.041
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