Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
| 3IM4 Chain:C ((15-20)) | ---------------------------------------------------------------------------------------------------------------------EELAWK----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 362 for 14 contacts (25.9/contact) +
2D Compatibility (PS) -509 + (NN) 557 + (LL) 21304
1D Compatibility (HY) -400 + (ID) 100
Total energy: 21214.0 ( 1515.29 by residue)
QMean score : -0.371
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