Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRAHAKKPLTTKSCKVKEGYMRRAHAKKPLTTKSCKVKEGYMHRAQAKKPLTTKGCKEEEGYMHRAHA
1BK8 Chain:A ((23-31))
-------------------------------------------------------QCQDWEKAS-----
General information:
TITO was launched using:
RESULT:
Template:
1BK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 390 for 29 contacts (13.4/contact) +
2D Compatibility (PS) -938 + (NN) -208 + (LL) 4456
1D Compatibility (HY) 400 + (ID) 100
Total energy: 4000.0 ( 137.93 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1BK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BK8-query.scw
PDB file :
Tito_Scwrl_1BK8.pdb
: