Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV
2DVY Chain:A ((74-106))
-----------------------------------------------YDYELSRMVRLAHEHGILTYNDIYELLKFADDV-----------
General information:
TITO was launched using:
RESULT:
Template:
2DVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14 for 144 contacts (-0.1/contact) +
2D Compatibility (PS) -3601 + (NN) -1547 + (LL) 5364
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -1248.0 ( -8.67 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2DVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DVY-query.scw
PDB file :
Tito_Scwrl_2DVY.pdb
: