Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNED--ESSPIINNKVITYDIGYSYMK
1SQE Chain:A ((18-124))
--FMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNWLNSDVFKEAH--------DDGQQSPILSNKVFKYDIGYHYQK
General information:
TITO was launched using:
RESULT:
Template:
1SQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37043 for 599 contacts (-61.8/contact) +
2D Compatibility (PS) -10283 + (NN) -493 + (LL) 732
1D Compatibility (HY) -11600 + (ID) 3250
Total energy: -61937.0 ( -103.40 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_1SQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SQE-query.scw
PDB file :
Tito_Scwrl_1SQE.pdb
: