Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
2GZY Chain:A ((1-104))
MAIVKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL
General information:
TITO was launched using:
RESULT:
Template:
2GZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63226 for 774 contacts (-81.7/contact) +
2D Compatibility (PS) -11151 + (NN) -4020 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 3250
Total energy: -94447.0 ( -122.02 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_2GZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZY-query.scw
PDB file :
Tito_Scwrl_2GZY.pdb
: