Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIK-FKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
1P9E Chain:A ((43-87)) | ----------------------------------------------------------------SAPGYYRMLLGDFEITALSDGTVALPVDKRLNQPAPKTQSALAKS--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3632 for 165 contacts (22.0/contact) +
2D Compatibility (PS) -4931 + (NN) -4394 + (LL) 9476
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -517.0 ( -3.13 by residue)
QMean score : 0.333
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