Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARV--VNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
2F41 Chain:A ((73-183))
-----------------------------------------------------------------------EVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVI---LALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMY-----
General information:
TITO was launched using:
RESULT:
Template:
2F41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75221 for 794 contacts (-94.7/contact) +
2D Compatibility (PS) -10700 + (NN) 4249 + (LL) 6024
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -89298.0 ( -112.47 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_2F41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F41-query.scw
PDB file :
Tito_Scwrl_2F41.pdb
: