Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKN---EFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
1R3E Chain:A ((1-281)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEER---ECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVK---IFKIWDVNIEGRDVSFRVEV--SPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAA----PEEIENRIIPLEKCLEWLPRVVVHQESTKM-ILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLAL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110759 for 2139 contacts (-51.8/contact) +
2D Compatibility (PS) -29285 + (NN) -5316 + (LL) 2236
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -168374.0 ( -78.72 by residue)
QMean score : 0.494
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