Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQISNINKSFNKRCVLKNISFDIEQGKCIALIGKNGAGKSTLI-------DILIGNVNANSGEIFDKDKLLQSENRSI--MFQK-TMFPDQLKVIEIINLYQSFYENPLPLE-------EIIELTKFDSSQLNQFVNKLSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNRTILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQSQITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITSNVNDTILYLQQLHINLDDIEIQKVSIVDSYFNNKKQRGSNYDTKLLENRI |
| 4U02 Chain:A ((4-236)) | IIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKD-DRALREIRREVGMVFQQFNLFP-HMTVLENVTLAPMRVRR-WPREKAEKKALELLERVGI-LDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRS------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136054 for 1679 contacts (-81.0/contact) +
2D Compatibility (PS) -23144 + (NN) -7516 + (LL) 5092
1D Compatibility (HY) -15200 + (ID) 3200
Total energy: -180022.0 ( -107.22 by residue)
QMean score : 0.435
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