Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILAEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPERDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMR-CDNLSEFLPQLKMQKVKS
1A53 Chain:A ((46-246))
------------------------------------------------AIIAEYKRKSPSGLDV-ERDPIEYSKFMERY-AVGLSILTEEKYFNGSYETLRKIASSVSIPILMKDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIEINDENDLDIALRIGARFIGINSRDLETLEINKENQRKLISMIPSNVVKVAESGISERNEIEELRKLGVNAFLIGSSLMRNPEKIKEFI----------
General information:
TITO was launched using:
RESULT:
Template:
1A53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128764 for 1646 contacts (-78.2/contact) +
2D Compatibility (PS) -21537 + (NN) -7703 + (LL) 4572
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -176282.0 ( -107.10 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_1A53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A53-query.scw
PDB file :
Tito_Scwrl_1A53.pdb
: