Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGPVIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDTGVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTMNATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIVKRFKSNTREEIIRYLQSIQQTLNN
1WXJ Chain:A ((43-255))
--------------------------ADLLEIGLPYS-----GPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVS-------------EVKDLVRRIKARTALPVAVGFGV-SGKATAAQAAVADGVVVGSALVRALEEG--RSLAPLLQEIRQGLQR
General information:
TITO was launched using:
RESULT:
Template:
1WXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157772 for 1523 contacts (-103.6/contact) +
2D Compatibility (PS) -21551 + (NN) -9068 + (LL) 2260
1D Compatibility (HY) -16800 + (ID) 3400
Total energy: -206331.0 ( -135.48 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_1WXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WXJ-query.scw
PDB file :
Tito_Scwrl_1WXJ.pdb
: