Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELKHVTFGYNK----KQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSD--------------NAVLTIFQHPLTSFNPDWTI--ETSLKEALYYYR--GLTDNTAQDQLLLQHLSTFELNAQLLTKLPSEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQNVINILKAQTITNLNHFIVISHDLSVLQRLVNRIIVLKDGMIVDDFAIEELFNVDRHPYTKELVQTFSY
4MKI Chain:B ((7-226))
-IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQY------PEYQLFEETVFKDIAFGPSNLGLSEEEVKER-VYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKI---------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141997 for 1536 contacts (-92.4/contact) +
2D Compatibility (PS) -21471 + (NN) -8852 + (LL) 2620
1D Compatibility (HY) -13200 + (ID) 3450
Total energy: -186350.0 ( -121.32 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: