Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLR--------LIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
1D2T Chain:A ((108-213)) | ----------------------------------------------------------------------------------------------DLATRSAKDHYMRIRPFAFYGVSTCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ---------NEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTNPA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1D2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46559 for 694 contacts (-67.1/contact) +
2D Compatibility (PS) -9344 + (NN) 3020 + (LL) 10868
1D Compatibility (HY) 4800 + (ID) 900
Total energy: -38115.0 ( -54.92 by residue)
QMean score : 0.217
|
|
|