Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFK------DREILQS-LNGMDKYIAKGIET----KLDIVVADEKEQGVRKFLNLGHTFGHAVE--YNHKIAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYP-------LETITDIDFETIYQYMLS---DKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
1DQS Chain:A ((78-372)) | ----------------------------------------------------------------PPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRR-----RFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109537 for 2030 contacts (-54.0/contact) +
2D Compatibility (PS) -27607 + (NN) -3990 + (LL) 7596
1D Compatibility (HY) -24000 + (ID) 5100
Total energy: -162638.0 ( -80.12 by residue)
QMean score : 0.403
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