Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSRDIKELQLIKV-PIPSGQYVYSLPNDRK-----FHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL
3FHZ Chain:A ((18-169))
---RAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENL-
General information:
TITO was launched using:
RESULT:
Template:
3FHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83893 for 965 contacts (-86.9/contact) +
2D Compatibility (PS) -15989 + (NN) -5074 + (LL) 308
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -114698.0 ( -118.86 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3FHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHZ-query.scw
PDB file :
Tito_Scwrl_3FHZ.pdb
: