Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKVHICFVVKTASGYCYLNKREAQAAI
2VQM Chain:A ((163-173))
-----------STPMGFCYFNS-------
General information:
TITO was launched using:
RESULT:
Template:
2VQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1550 for 26 contacts (-59.6/contact) +
2D Compatibility (PS) -1150 + (NN) -1 + (LL) 2640
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -1911.0 ( -73.50 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2VQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQM-query.scw
PDB file :
Tito_Scwrl_2VQM.pdb
: