Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQTIIIGGGPSGLMAAVAASEQSSSVLLIEKKKGLGRKLKISGGGRCNVTNRLPYAEIIKNI----------PGNGKFLYSPFSIFDNESI--IDFFESRGVKL---KEEDHGRM----FPVSNKAQ--DVVDTLVTTIERQHVTIKEEEAVSRIEVNTDQTFT---VHTQNNSY---ESHSLVIATGG------------------TSVPQTGSTGDGYKFAQDLGHTITELFPTEVPITSAEPFI-KSNR-LKGLSLKDVELSVLKKNGKKRISHQMDMLFTHFGISGPAALRCSQFVYKEQKNQKTQHISMAIDAFPELNHEQLKQHITSLLSDTPDKIIKNSLHGLIEERYLLFMLEQAGIDEN---TTSHHLSNQQLNDLVNMFKGFVFKVNGTLPIDKAFVTGGGVSLKEIQPK-TMMSKLVPGLFLCGEVL-DIHGYT--GGYNITSALVTGHVAGLYAGHYSHTSME |
| 1QO8 Chain:A ((123-563)) | --QVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIGASM-----TDIDWVQAHPTVGKDSRILISETVRGVGAVMVNKDGNRFISE----LTTRDKASDAILKQPGQFAWIIFDNQLYKKAKM-VRGYDHL--EMLYK------GDTVEQLAKSTGMKVAD-------LAKTVSDYNGYVASGKDTAFGRADMPLNMTQSPYYAVKVAPGIHH---TMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35822 for 3378 contacts (-10.6/contact) +
2D Compatibility (PS) -39809 + (NN) 7393 + (LL) 3652
1D Compatibility (HY) -11600 + (ID) 5400
Total energy: -81586.0 ( -24.15 by residue)
QMean score : 0.287
|
|
|