Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLKNFFIGLSNNSFLNNAAKKVGPRLGANKVVAGNTIPELINTIEYLNDKNIAVTVDNLGEFVGTVEESNHAKEQILTIMDALHQ--------------------HGVKAHMSVKLSQLGA-------EFDLELAYQNLREILLKANTYNNMHINIDTEKYASLQQIVQVLDRLKGEFRN---VGTVIQAY-------------LYDSHKLVDKYQDLRLRLVKGAYKENESI----------AFQSKEDVDANYIKIIEQRLLNAR-NFTSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYNFTIYVPYGD--DWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGATVMLGLSTIKKLCRK |
| 4NMB Chain:A ((117-457)) | -----------------------------ARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEVYTNTYLELLEALKKEQGSWKGLPGKGGDPGLDWGHAPKVNIAVKPTALFCLANPQDFEGSVVAILDRMRRIFKKVMELNGF-LCIDMESYRHKEIILEVFRRLKLEYRDYPHLGIVLQAYLKDNDKDLDDLLAWAKEHKV-----QISVRLVKGAYWDYETVKAKQNDWEVPVWTIKAESDAAYERQARKILENHQICHFACASHNIRTISAVMEMARELNVPEDRYEFQVLYGMAEPVRKGILKVAGRIRLYAPYGNMVPGMGYLVRRLLENTANESFLRQSFAEDAQIERL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114818 for 2193 contacts (-52.4/contact) +
2D Compatibility (PS) -30092 + (NN) -10009 + (LL) 3984
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -173335.0 ( -79.04 by residue)
QMean score : 0.452
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