Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHD-IKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELF-EATDDFDYIVAMDQSNVDNIKSIN---PNLKGQLFKLLEFSNMEESDVPDPYYTN--NFEGVYDMVLSSCDNLIDYIVKDANLKEG
4Z99 Chain:A ((15-161))
---VLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLE-----------
General information:
TITO was launched using:
RESULT:
Template:
4Z99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85605 for 1150 contacts (-74.4/contact) +
2D Compatibility (PS) -14865 + (NN) -6267 + (LL) 1036
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -123001.0 ( -106.96 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_4Z99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z99-query.scw
PDB file :
Tito_Scwrl_4Z99.pdb
: