Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFKEAQAFIENMYKECHYETQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNVIDARDVTDEASFLSSITYHITQATNEGKLKPYITIYAPKD-GPK---IFNNQLIRYAGYDN---CGDPAEKEVTRLANHLGWKGKGTNFDVLPLIYQL-PNESVKFYEYPTSLIKEVPIEHNHYPKLRKLNLKWYAVPIISNMDLKIGGIVYPTAPFNGWYMVTEIGVRNFIDDYRYNLLEKVADAFEFDTLKNNSFNKDRALVELNYAVYHSFKKEGVSIVDHLTAAKQFELFERNEAQQGRQVTGKWSWLAPPLSPTLTSNYHHGYDNTVKDPNFFYKKKESNANQCPFHH |
| 1M7V Chain:A ((6-360)) | ILWNEAKAFIAECYQELGKEEEV-KDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDRRDVRTKEDVRDALFHHIETATNNGKIRPSITIFPPEEKGEKQVEIWNHQLIRYAGYE-GERIGDPASRSLTAACEQLGWRGERTDFDLLPLIFRMRGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYMGTEIGARNLADEKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKRFEEQEEEAGRKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171838 for 2751 contacts (-62.5/contact) +
2D Compatibility (PS) -38249 + (NN) -21323 + (LL) 440
1D Compatibility (HY) -33600 + (ID) 9400
Total energy: -273970.0 ( -99.59 by residue)
QMean score : 0.655
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