Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRSLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
1BUI Chain:C ((7-128))
-----------------------------------------ASYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
General information:
TITO was launched using:
RESULT:
Template:
1BUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58599 for 845 contacts (-69.3/contact) +
2D Compatibility (PS) -13297 + (NN) -4302 + (LL) 2720
1D Compatibility (HY) -17200 + (ID) 6000
Total energy: -96678.0 ( -114.41 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1BUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BUI-query.scw
PDB file :
Tito_Scwrl_1BUI.pdb
: