Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK
2DAE Chain:A ((22-28))
----------------------------------PEVPEVV------
General information:
TITO was launched using:
RESULT:
Template:
2DAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1219 for 13 contacts (-93.8/contact) +
2D Compatibility (PS) -705 + (NN) -1036 + (LL) 2900
1D Compatibility (HY) -800 + (ID) 150
Total energy: -1010.0 ( -77.69 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2DAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DAE-query.scw
PDB file :
Tito_Scwrl_2DAE.pdb
: