Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE |
1LM1 Chain:A ((825-865)) | ----------------------------------------------DHYELYRQYLKDRPVTALRDLLDFNADQPAISLEEVESVES----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3154 for 130 contacts (-24.3/contact) +
2D Compatibility (PS) -4095 + (NN) 1440 + (LL) 8760
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -349.0 ( -2.68 by residue)
QMean score : 0.213
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