Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYN------DLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEI---EGVSLFELQA------NQLKTLNHQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQ-PKPGESVGRLVNVDCKDTVLEYSELDPEVANQ--------FNNANIGIHAFKLGFILNAVN---RELPYHLAIKNLKQLDEN--FGVIEQPT-LKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKE--GKDSVATATEDLRRMGLI
1VM8 Chain:A ((19-464))---KQRLSQAGQEHLLQFWNELSEAQQMELYMELQAMNFEELNSFFRKAIGEFDRSSHQEKVDARMEPVPRQVLGSATRDQEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKGMYDVGLPSHKTLFQIQAERILKLQQLAEKHHGNKCTIPWYIMTSGRTMESTKEFFTKHKFFGLKKENVVFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRSSDGRLLFNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGYFIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQGKDNPTTARHALMSL---


General information:
TITO was launched using:
RESULT:

Template: 1VM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121235 for 3068 contacts (-39.5/contact) +
2D Compatibility (PS) -42378 + (NN) -19656 + (LL) 516
1D Compatibility (HY) -29200 + (ID) 6800
Total energy: -218753.0 ( -71.30 by residue)
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_1VM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VM8-query.scw
PDB file : Tito_Scwrl_1VM8.pdb: