Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRLL-FVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVDELHGTLNRFYCNACHKSYTKSDVIDRT----LKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAA--GLISHFKGDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE
2H2I Chain:A ((9-242))
----------LLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQN------VFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVMEE
General information:
TITO was launched using:
RESULT:
Template:
2H2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110284 for 1874 contacts (-58.8/contact) +
2D Compatibility (PS) -24135 + (NN) -6310 + (LL) 800
1D Compatibility (HY) -22800 + (ID) 4700
Total energy: -167429.0 ( -89.34 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2H2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H2I-query.scw
PDB file :
Tito_Scwrl_2H2I.pdb
: