Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYIKN
2PFB Chain:A ((25-113))
---------LYSANLAMHKLYRGLLKALDLTYPQ-YLVMLVLW-ETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VIIALTETGRA---------------
General information:
TITO was launched using:
RESULT:
Template:
2PFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27427 for 516 contacts (-53.2/contact) +
2D Compatibility (PS) -8677 + (NN) -3811 + (LL) 2392
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -46373.0 ( -89.87 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_2PFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PFB-query.scw
PDB file :
Tito_Scwrl_2PFB.pdb
: