Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNH-----TPSKGAILQSSEGPF---GHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI
4OLK Chain:A ((74-142))
----------------------------------------------------------------------------------RTWGNAKDQIKQSYGTGFKIHENKPSTVPKKGWIAVFTSGSYQQWGHIGIVYDGGNTSTFTILEQNWNG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9269 for 312 contacts (-29.7/contact) +
2D Compatibility (PS) -6988 + (NN) -5300 + (LL) 5008
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -20399.0 ( -65.38 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_4OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OLK-query.scw
PDB file :
Tito_Scwrl_4OLK.pdb
: