Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKY--KSEQLILDERNFESLMRQFDF-EAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
3GT6 Chain:A ((46-135))
-------------------------------------VDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPK----------------
General information:
TITO was launched using:
RESULT:
Template:
3GT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52654 for 546 contacts (-96.4/contact) +
2D Compatibility (PS) -9225 + (NN) 875 + (LL) 1628
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -65876.0 ( -120.65 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3GT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GT6-query.scw
PDB file :
Tito_Scwrl_3GT6.pdb
: